• Title of article

    A parallel and modular deformable cell Car–Parrinello code Original Research Article

  • Author/Authors

    Carlo Cavazzoni، نويسنده , , Guido L. Chiarotti، نويسنده ,

  • Issue Information
    دوهفته نامه با شماره پیاپی سال 1999
  • Pages
    21
  • From page
    56
  • To page
    76
  • Abstract
    We have developed a modular parallel code implementing the Car–Parrinello [Phys. Rev. Lett. 55 (1985) 2471] algorithm including the variable cell dynamics [Europhys. Lett. 36 (1994) 345; J. Phys. Chem. Solids 56 (1995) 510]. Our code is written in Fortran 90, and makes use of some new programming concepts like encapsulation, data abstraction and data hiding. The code has a multi-layer hierarchical structure with tree like dependences among modules. The modules include not only the variables but also the methods acting on them, in an object oriented fashion. The modular structure allows easier code maintenance, develop and debugging procedures, and is suitable for a developer team. The layer structure permits high portability. The code displays an almost linear speed-up in a wide range of number of processors independently of the architecture. Super-linear speed up is obtained with a “smart” Fast Fourier Transform (FFT) that uses the available memory on the single node (increasing for a fixed problem with the number of processing elements) as temporary buffer to store wave function transforms. This code has been used to simulate water and ammonia at giant planet conditions for systems as large as 64 molecules for ∼50 ps.
  • Keywords
    Computer , Parallel , molecular dynamics , Simulations , Modular programming
  • Journal title
    Computer Physics Communications
  • Serial Year
    1999
  • Journal title
    Computer Physics Communications
  • Record number

    1135239