• Title of article

    A transition state analog for phosphate diester cleavage catalyzed by a small enzyme-like metal ion complex

  • Author/Authors

    Yang، نويسنده , , Meng-Yin and Morrow، نويسنده , , Janet R. and Richard، نويسنده , , John P.، نويسنده ,

  • Issue Information
    روزنامه با شماره پیاپی سال 2007
  • Pages
    9
  • From page
    366
  • To page
    374
  • Abstract
    The values of Ki for methylphosphate dianion (MP2−) inhibition of the cleavage of 2-hydroxypropyl-4-nitrophenyl phosphate (HpPNP) catalyzed by 1,3-bis(1,4,7-triazacyclonon-1-yl)-2-hydroxypropane (Zn2(1)(H2O)) approach a small limiting value of 6 μM at pH < pKa = 7.8 for deprotonation of the catalyst to form Zn2(1)(HO−). There is a 1600-fold difference in the affinity of a phosphate diester monoanion (diethylphosphate) and phosphate monester dianion (MP2−) for Zn2(1)(H2O). This suggests that the latter is an analog for the transition state dianion for the cleavage reaction of HpPNP and other phosphate diesters. The observation that this transition state analog binds selectively to Zn2(1)(H2O) provides strong evidence that this is the active form of the catalyst which binds selectively to the ionized substrate. The efficiency of catalysis of the cleavage of phosphate diesters by Zn2(1)(H2O) and proteins is compared.
  • Keywords
    metal ion catalysis , Phosphate diester , RNA analog
  • Journal title
    Bioorganic Chemistry: an International Journal
  • Serial Year
    2007
  • Journal title
    Bioorganic Chemistry: an International Journal
  • Record number

    1385950