3D-QSAR studies of farnesyltransferase inhibitors: A comparative molecular field analysis approach

3D-QSAR analysis has been performed on a series of previously synthesized benzonitrile derivatives, which were screened as farnesyltransferase inhibitors, using comparative molecular field analysis (CoMFA) with partial least-square fit to predict the steric and electrostatic molecular field interactions for the activity. The CoMFA study was carried out using a training set of 34 compounds. The predictive ability of the model developed was assessed using a test set of eight compounds ( as high as 0.770). The analyzed 3D-QSAR CoMFA model has demonstrated a good fit, having r2 value of 0.991 and cross-validated coefficient q2 value as 0.619. The analysis of CoMFA contour maps provided insight into the possible modification of the molecules for better activity.