• DocumentCode
    109211
  • Title

    Adverse Drug Effect Detection

  • Author

    Lian Duan ; Khoshneshin, M. ; Street, W. Nick ; Mei Liu

  • Author_Institution
    Dept. of Inf. Syst., New Jersey Inst. of Technol., Newark, NJ, USA
  • Volume
    17
  • Issue
    2
  • fYear
    2013
  • fDate
    Mar-13
  • Firstpage
    305
  • Lastpage
    311
  • Abstract
    Large collections of electronic patient records provide abundant but under-explored information on the real-world use of medicines. Although they are maintained for patient administration, they provide a broad range of clinical information for data analysis. One growing interest is drug safety signal detection from these longitudinal observational data. In this paper, we proposed two novel algorithms-a likelihood ratio model and a Bayesian network model-for adverse drug effect discovery. Although the performance of these two algorithms is comparable to the state-of-the-art algorithm, Bayesian confidence propagation neural network, the combination of three works better due to their diversity in solutions. Since the actual adverse drug effects on a given dataset cannot be absolutely determined, we make use of the simulated observational medical outcomes partnership (OMOP) dataset constructed with the predefined adverse drug effects to evaluate our methods. Experimental results show the usefulness of the proposed pattern discovery method on the simulated OMOP dataset by improving the standard baseline algorithm-chi-square-by 23.83%.
  • Keywords
    belief networks; data mining; drugs; medical information systems; neural nets; Bayesian confidence propagation neural network; Bayesian network model; Observational Medical Outcomes Partnership; adverse drug effect detection; adverse drug effect discovery; clinical information; data analysis; drug safety signal detection; electronic patient records; likelihood ratio model; longitudinal observational data; pattern discovery method; simulated OMOP dataset; Bayesian methods; Correlation; Drugs; Random variables; Safety; Signal detection; Adverse drug effect; Bayesian confidence propagation neural network (BCPNN); Bayesian network; correlation; likelihood ratio (LR); Algorithms; Bayes Theorem; Chi-Square Distribution; Cluster Analysis; Computational Biology; Computer Simulation; Drug-Related Side Effects and Adverse Reactions; Electronic Health Records; Humans; Models, Statistical; Neural Networks (Computer);
  • fLanguage
    English
  • Journal_Title
    Biomedical and Health Informatics, IEEE Journal of
  • Publisher
    ieee
  • ISSN
    2168-2194
  • Type

    jour

  • DOI
    10.1109/TITB.2012.2227272
  • Filename
    6399500