• DocumentCode
    1444137
  • Title

    A Bayesian Mixture Approach to Modeling Spatial Activation Patterns in Multisite fMRI Data

  • Author

    Kim, Seyoung ; Smyth, Padhraic ; Stern, Hal

  • Author_Institution
    Machine Learning Dept., Carnegie Mellon Univ., Pittsburgh, PA, USA
  • Volume
    29
  • Issue
    6
  • fYear
    2010
  • fDate
    6/1/2010 12:00:00 AM
  • Firstpage
    1260
  • Lastpage
    1274
  • Abstract
    We propose a probabilistic model for analyzing spatial activation patterns in multiple functional magnetic resonance imaging (fMRI) activation images such as repeated observations on an individual or images from different individuals in a clinical study. Instead of taking the traditional approach of voxel-by-voxel analysis, we directly model the shape of activation patterns by representing each activation cluster in an image as a Gaussian-shaped surface. We assume that there is an unknown true template pattern and that each observed image is a noisy realization of this template. We model an individual image using a mixture of experts model with each component representing a spatial activation cluster. Taking a nonparametric Bayesian approach, we use a hierarchical Dirichlet process to extract common activation clusters from multiple images and estimate the number of such clusters automatically. We further extend the model by adding random effects to the shape parameters to allow for image-specific variation in the activation patterns. Using a Bayesian framework, we learn the shape parameters for both image-level activation patterns and the template for the set of images by sampling from the posterior distribution of the parameters. We demonstrate our model on a dataset collected in a large multisite fMRI study.
  • Keywords
    Bayes methods; biomedical MRI; medical image processing; neurophysiology; pattern clustering; Bayesian mixture approach; fMRI activation images; hierarchical Dirichlet process; image-specific variation; multiple functional magnetic resonance imaging; spatial activation cluster; spatial activation patterns; voxel-by-voxel analysis; Active shape model; Bayesian methods; Biomedical imaging; Computer science; Data analysis; Gaussian processes; Image analysis; Magnetic analysis; Magnetic resonance imaging; Pattern analysis; Brain activation; functional magnetic resonance imaging (fMRI); hierarchical model; Algorithms; Artificial Intelligence; Bayes Theorem; Brain; Brain Mapping; Evoked Potentials; Humans; Image Enhancement; Image Interpretation, Computer-Assisted; Magnetic Resonance Imaging; Pattern Recognition, Automated; Reproducibility of Results; Sensitivity and Specificity;
  • fLanguage
    English
  • Journal_Title
    Medical Imaging, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0278-0062
  • Type

    jour

  • DOI
    10.1109/TMI.2010.2044045
  • Filename
    5433022