• DocumentCode
    1641180
  • Title

    Parameter Identification for a DNA replication model

  • Author

    Koutroumpas, K. ; Lygerou, Z. ; Lygeros, J.

  • Author_Institution
    Autom. Control Lab., ETH Zurich, Zurich
  • fYear
    2008
  • Firstpage
    1
  • Lastpage
    6
  • Abstract
    DNA replication is one of the most fundamental processes in the life of every cell. In earlier work a model to capture the mechanics of the DNA replication process was developed. The model allowed us to make novel predictions regarding the mechanisms behind DNA replication based on experimental data for the fission yeast. One of the difficulties we had to overcome in the process was tuning of the model parameters based on experimental data, which, for lack of better methods had to be done manually. Here we propose a methodology for systematizing this process, inspired by techniques for multi-objective optimization.
  • Keywords
    DNA; cellular biophysics; molecular biophysics; optimisation; DNA replication model; cell; fission yeast; optimization; Bioinformatics; Biological system modeling; Cells (biology); DNA; Fungi; Genetics; Genomics; Laboratories; Optimization methods; Parameter estimation;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    BioInformatics and BioEngineering, 2008. BIBE 2008. 8th IEEE International Conference on
  • Conference_Location
    Athens
  • Print_ISBN
    978-1-4244-2844-1
  • Electronic_ISBN
    978-1-4244-2845-8
  • Type

    conf

  • DOI
    10.1109/BIBE.2008.4696726
  • Filename
    4696726