DocumentCode
1822119
Title
Deconvolution of 3D fluorescence micrographs with automatic risk minimization
Author
Ramani, Sathish ; Vonesch, Cedric ; Unser, Michael
Author_Institution
Biomed. Imaging Group, Ecole Polytech. Fed. de Lausanne (EPFL), Lausanne
fYear
2008
fDate
14-17 May 2008
Firstpage
732
Lastpage
735
Abstract
We investigate the problem of automatic tuning of a deconvolution algorithm for three-dimensional (3D) fluorescence microscopy; specifically, the selection of the regularization parameter lambda. For this, we consider a realistic noise model for data obtained from a CCD detector: Poisson photon-counting noise plus Gaussian read-out noise. Based on this model, we develop a new risk measure which unbiasedly estimates the original mean-squared-error of the deconvolved signal estimate. We then show how to use this risk estimate to optimize the regularization parameter for Tikhonov-type deconvolution algorithms. We present experimental results on simulated data and numerically demonstrate the validity of the proposed risk measure. We also present results for real 3D microscopy data.
Keywords
Gaussian noise; biomedical optical imaging; deconvolution; fluorescence; image enhancement; medical image processing; optical microscopy; CCD detector; Gaussian read-out noise; Poisson photon-counting noise; Tikhonov-type deconvolution; automatic risk minimization; deconvolution algorithm; image formation model; noise model; three-dimensional fluorescence microscopy; unbiased risk estimate; Additive noise; Background noise; Biomedical measurements; Charge coupled devices; Deconvolution; Detectors; Fluorescence; Gaussian noise; Microscopy; Risk management; 3D fluorescence microscopy; CCD Noise; Deconvolution; Unbiased risk estimate (URE);
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on
Conference_Location
Paris
Print_ISBN
978-1-4244-2002-5
Electronic_ISBN
978-1-4244-2003-2
Type
conf
DOI
10.1109/ISBI.2008.4541100
Filename
4541100
Link To Document