• DocumentCode
    182988
  • Title

    A biclustering algorithm with coherent evolution on the contiguous columns facing time-series gene data

  • Author

    Yun Xue ; Meihang Li ; Zhengling Liao ; Jie Luo ; Tiechen Li ; Hua Xiao ; Xiaohui Hu

  • Author_Institution
    Sch. of Phys. & Telecommun. Eng., South China Normal Univ., Guangzhou, China
  • fYear
    2014
  • fDate
    19-21 Aug. 2014
  • Firstpage
    328
  • Lastpage
    333
  • Abstract
    Biclustering technique has become an important tool in analysis of gene expression data. However, most traditional biclustering algorithms focus on biclustering model on non-continuous column. For time series gene expression data, these models neglect the important internal sequential relationship between the time intervals, thus it is not suitable for this kind of data. This paper proposes an effective and exact algorithm, which can be used to mine biclusters with coherent evolution on the contiguous columns on time series gene expression data. The experimental results show that the algorithm can find biclusters of statistical significance and rather strong biological relevance.
  • Keywords
    biology computing; data analysis; lab-on-a-chip; pattern clustering; time series; biclustering algorithm; gene expression data analysis; noncontinuous column biclustering model; time-series gene expression data; Algorithm design and analysis; Clustering algorithms; Evolution (biology); Gene expression; Matrix converters; Time series analysis; biclustering; consistent evolution; continuous columns; time-series data;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Fuzzy Systems and Knowledge Discovery (FSKD), 2014 11th International Conference on
  • Conference_Location
    Xiamen
  • Print_ISBN
    978-1-4799-5147-5
  • Type

    conf

  • DOI
    10.1109/FSKD.2014.6980855
  • Filename
    6980855