DocumentCode
182988
Title
A biclustering algorithm with coherent evolution on the contiguous columns facing time-series gene data
Author
Yun Xue ; Meihang Li ; Zhengling Liao ; Jie Luo ; Tiechen Li ; Hua Xiao ; Xiaohui Hu
Author_Institution
Sch. of Phys. & Telecommun. Eng., South China Normal Univ., Guangzhou, China
fYear
2014
fDate
19-21 Aug. 2014
Firstpage
328
Lastpage
333
Abstract
Biclustering technique has become an important tool in analysis of gene expression data. However, most traditional biclustering algorithms focus on biclustering model on non-continuous column. For time series gene expression data, these models neglect the important internal sequential relationship between the time intervals, thus it is not suitable for this kind of data. This paper proposes an effective and exact algorithm, which can be used to mine biclusters with coherent evolution on the contiguous columns on time series gene expression data. The experimental results show that the algorithm can find biclusters of statistical significance and rather strong biological relevance.
Keywords
biology computing; data analysis; lab-on-a-chip; pattern clustering; time series; biclustering algorithm; gene expression data analysis; noncontinuous column biclustering model; time-series gene expression data; Algorithm design and analysis; Clustering algorithms; Evolution (biology); Gene expression; Matrix converters; Time series analysis; biclustering; consistent evolution; continuous columns; time-series data;
fLanguage
English
Publisher
ieee
Conference_Titel
Fuzzy Systems and Knowledge Discovery (FSKD), 2014 11th International Conference on
Conference_Location
Xiamen
Print_ISBN
978-1-4799-5147-5
Type
conf
DOI
10.1109/FSKD.2014.6980855
Filename
6980855
Link To Document