• DocumentCode
    1873950
  • Title

    Modeling and analysis of DNA hybridization dynamics at microarray surface in moving fluid

  • Author

    Hogg, Tad ; Zhang, Mingjun ; Yang, Ruoting

  • Author_Institution
    Hewlett-Packard Labs., Palo Alto, CA
  • fYear
    2008
  • fDate
    19-23 May 2008
  • Firstpage
    3419
  • Lastpage
    3424
  • Abstract
    This paper proposes a dynamic model of DNA microarray hybridization properties in moving fluid. Prior experimental studies indicate hybridization efficiency is closely related to fluid dynamics, temperature, DNA probe density and microarray surface properties. Simulation results using the model proposed here agree well with practical observations. The model may be used to improve and manipulate performance of DNA microarray hybridization, and implement as a control model for hybridization automation to improve reliability and robustness of microarray hybridization process.
  • Keywords
    DNA; fluid dynamics; genetic engineering; genetics; DNA microarray hybridization properties; DNA probe density; fluid dynamics; hybridization automation; Aerodynamics; Automatic control; Automation; DNA; Fluid dynamics; Kinetic theory; Probes; Robust control; Temperature; Throughput;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Robotics and Automation, 2008. ICRA 2008. IEEE International Conference on
  • Conference_Location
    Pasadena, CA
  • ISSN
    1050-4729
  • Print_ISBN
    978-1-4244-1646-2
  • Electronic_ISBN
    1050-4729
  • Type

    conf

  • DOI
    10.1109/ROBOT.2008.4543733
  • Filename
    4543733