• DocumentCode
    2024882
  • Title

    Improving the Biological Relevance of Biclustering for Microarray Data in Using Ensemble Methods

  • Author

    Hanczar, Blaise ; Nadif, Mohamed

  • Author_Institution
    LIPADE, Univ. Paris Descartes, Paris, France
  • fYear
    2011
  • fDate
    Aug. 29 2011-Sept. 2 2011
  • Firstpage
    413
  • Lastpage
    417
  • Abstract
    Biclustering is become undoubtedly a current tool for micro array data analysis. Its objective is to identify a set of biclusters, i.e. sub matrices of the original data matrix, presenting a particular pattern. A large number of biclustering methods have already been proposed for gene expression data. Based on ensemble methods, w e propose a new approach improving the performance of all existing biclustering algorithms. Further, we show that the ensemble biclustering can be seen as a problem of binary triclustering and propose an algorithm to solve it. The results on three public micro array datasets show that the ensemble approach produces better biclusters than single approach.
  • Keywords
    biology computing; data analysis; matrix algebra; pattern clustering; biclustering methods; binary triclustering; biological relevance; data matrix; ensemble methods; gene expression data; microarray data analysis; public micro array datasets; Bagging; Bioinformatics; Biological system modeling; Cancer; Gene expression; Lungs; Biclustering; ensemble method; gene expression;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Database and Expert Systems Applications (DEXA), 2011 22nd International Workshop on
  • Conference_Location
    Toulouse
  • ISSN
    1529-4188
  • Print_ISBN
    978-1-4577-0982-1
  • Type

    conf

  • DOI
    10.1109/DEXA.2011.44
  • Filename
    6059852