• DocumentCode
    2028071
  • Title

    Classification of subcellular location patterns in fluorescence microscope images based on modified threshold adjacency statistics

  • Author

    Kheirkhah, Fateme Mostajer ; Haghipour, Siamak

  • Author_Institution
    Tabriz Branch, Electron. Eng., Islamic Azad Univ., Tabriz, Iran
  • fYear
    2010
  • fDate
    27-28 Oct. 2010
  • Firstpage
    1
  • Lastpage
    7
  • Abstract
    The ongoing biotechnology revolution promises a complete understanding of the mechanisms by which cells and tissues carry out their functions. As proteins are integral components of cell function, it is critical to understand their properties such as structure and localization. The study of protein subcellular localization (PSL) is important for elucidating protein functions involved in various cellular processes. The subcellular location of proteins is most often determined by visual interpretation of fluorescence microscope images, but in recent years, to perform high-resolution, high-throughput analysis of ten thousands of expressed proteins for the many cell types and cellular conditions under which they may be found creates, automated methods that are needed. In this review, we use a novel method that determines an improved features set, that distinguish subcellular patterns with high accuracy and high speed. This method based on modified threshold adjacency statistics (MTAS), the essence which is to threshold the images. Previous work that uses threshold adjacency statistics (TAS), introduces a simple set of Subcellular Location Features (SLF) which are computed by counting the number of threshold pixels adjacent.
  • Keywords
    biological tissues; biotechnology; cellular biophysics; fluorescence; image classification; image resolution; image segmentation; medical image processing; microscopy; proteins; statistics; automated methods; biological tissues; biotechnology; cell function; cellular process; feature set; fluorescence microscope images; high-throughput analysis; image resolution; modified threshold adjacency statistics; protein subcellular localization; subcellular location pattern classification; visual interpretation; Accuracy; Databases; Fluorescence; Kernel; Pixel; Proteins; Support vector machines; SVM; pattern; subcellular location features; threshold adjacency statistics;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Machine Vision and Image Processing (MVIP), 2010 6th Iranian
  • Conference_Location
    Isfahan
  • Print_ISBN
    978-1-4244-9706-5
  • Type

    conf

  • DOI
    10.1109/IranianMVIP.2010.5941162
  • Filename
    5941162