DocumentCode
21167
Title
Integrated Fluidic-Chip Co-Design Methodology for Digital Microfluidic Biochips
Author
Jia-Wen Chang ; Sheng-Han Yeh ; Tsung-wei Huang ; Tsung-Yi Ho
Author_Institution
Nat. Cheng Kung Univ., Tainan, Taiwan
Volume
32
Issue
2
fYear
2013
fDate
Feb. 2013
Firstpage
216
Lastpage
227
Abstract
Recently, digital microfluidic biochips (DMFBs) have revolutionized many biochemical laboratory procedures and received much attention due to their many advantages, such as high throughput, automatic control, and low cost. To meet the challenges of increasing design complexity, computer-aided-design (CAD) tools have been used to build DMFBs efficiently. Current CAD tools generally conduct a two-stage based design flow of fluidic-level synthesis followed by chip-level design to optimize fluidic behaviors and chip architecture separately. Nevertheless, existing fluidic-chip design gap will become even wider with a rapid escalation in the number of assay operations incorporated into a single DMFB. As more and more large-scale assay protocols are delivered in the current emerging marketplace, this problem may potentially restrict the effectiveness and feasibility of the entire DMFB realization and thus needs to be solved quickly. In this paper, we propose the first fluidic-chip co-design methodology for DMFBs to effectively bridge the fluidic-chip design gap. Our work provides a comprehensive integration throughout fluidic-operation scheduling, chip layout generation, control pin assignment, and wiring solution to achieve higher design performance and feasibility. Experimental results show the effectiveness, robustness, and scalability of our co-design methodology on a set of real-life assay applications.
Keywords
CAD; electronic engineering computing; hardware-software codesign; integrated circuit layout; lab-on-a-chip; microfluidics; biochemical laboratory; chip layout generation; computer aided design tools; control pin assignment; digital microfluidic biochips; fluidic operation scheduling; integrated fluidic-chip codesign; large scale assay protocol; wiring solution; Complexity theory; Design automation; Electrodes; Mixers; Pins; Routing; Wiring; Biochip; co-design; digital microfluidics; integer linear programming (ILP);
fLanguage
English
Journal_Title
Computer-Aided Design of Integrated Circuits and Systems, IEEE Transactions on
Publisher
ieee
ISSN
0278-0070
Type
jour
DOI
10.1109/TCAD.2012.2224347
Filename
6416099
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