DocumentCode
2514234
Title
New Fast Algorithm on DNA Sequence Alignment
Author
Fan Jing ; Jiao Ruili
Author_Institution
Beijing Inf. Sci. & Technol., China Univ., Beijing, China
fYear
2009
fDate
11-13 June 2009
Firstpage
1
Lastpage
4
Abstract
In this paper, a new method for fast DNA sequence alignment is presented. The method is called as fast alignment code (FAC). For long DNA sequence, the matching for two DNA sequences is imported but with very high workload. This paper studies the parallel operation way to reduce the alignment workload and the test result show the FAC method efficiency.
Keywords
DNA; bioinformatics; molecular biophysics; pattern matching; DNA matching; DNA sequence alignment; FAC method efficiency; fast alignment code; parallel operation; Autocorrelation; Biological information theory; Biology computing; Concurrent computing; DNA computing; FCC; Humans; Information science; Sequences; Testing;
fLanguage
English
Publisher
ieee
Conference_Titel
Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
Conference_Location
Beijing
Print_ISBN
978-1-4244-2901-1
Electronic_ISBN
978-1-4244-2902-8
Type
conf
DOI
10.1109/ICBBE.2009.5163102
Filename
5163102
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