• DocumentCode
    2517329
  • Title

    Proteome Characteristic Pattern Study of Unstable Angina with Blood Stasis Symptom Based on Least Angle Regression Algorithm

  • Author

    Zhao, Huihui ; Chen, Jianxin ; Hou, Na ; Lu, Weidong ; Wang, Wei

  • Author_Institution
    Beijing Univ. of Chinese Med., Beijing, China
  • fYear
    2009
  • fDate
    11-13 June 2009
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    The aim of this study was to analyze the proteome characteristic pattern of unstable angina with blood stasis symptom. Plasma samples were obtained from twelve unstable angina patients and twelve healthy volunteers. To remove the six most abundant proteins, a polyclonal antibody affinity column was used. Then, the two classes of samples were separated by 2D- DIGE. The differentially expressed protein spots were selected and identified with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) or MS-MS. In the end, using least angle regression algorithm, we studied the proteome characteristic pattern of unstable angina with blood stasis symptom. There are significant difference between unstable angina patients and healthy volunteers. The seventeen proteins made pattern could distinguish unstable angina with qi deficiency and blood stasis syndrome patients from the healthy people and it is probably the proteome characteristic pattern of unstable angina patients with qi deficiency and blood stasis syndrome; The twelve proteins made pattern could distinguish unstable angina with intermingled phlegm and blood stasis syndrome patients from the healthy people and it is probably the proteome characteristic pattern of unstable angina patients with intermingled phlegm and blood stasis syndrome. Using the seventeen proteins made pattern, the unstable angina with qi deficiency and blood stasis syndrome diagnosis accuracy could reach 100 % . Using the twelve proteins made pattern, the unstable angina with intermingled phlegm and blood stasis syndrome diagnosis accuracy also could reach 100%. The least angle regression may be a suitable data mining method for the discovery of illness diagnosis pattern.
  • Keywords
    bioinformatics; blood; cardiology; data mining; diseases; electrophoresis; patient diagnosis; proteins; proteomics; regression analysis; time of flight mass spectroscopy; 2D DIGE; MALDI-TOF-MS; blood stasis symptom; data mining; least angle regression algorithm; matrix-assisted laser desorption/ionization time-of-flight mass spectrometry; patient diagnosis; phlegm; polyclonal antibody affinity column; proteins; proteome characteristic pattern; unstable angina; Blood; Cardiac disease; Electrokinetics; Hospitals; Humans; Mass spectroscopy; Medical diagnostic imaging; Myocardium; Plasma properties; Proteins;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
  • Conference_Location
    Beijing
  • Print_ISBN
    978-1-4244-2901-1
  • Electronic_ISBN
    978-1-4244-2902-8
  • Type

    conf

  • DOI
    10.1109/ICBBE.2009.5163259
  • Filename
    5163259