• DocumentCode
    2520869
  • Title

    PERCEPTUAL GROUPING OF MEMBRANE SIGNALS IN CELL-BASED ASSAYS

  • Author

    Chang, H. ; Andarawewa, K.L. ; Han, J. ; Barcellos-Hoff, M.H. ; Parvin, B.

  • Author_Institution
    Lawrence Berkeley Nat. Lab., CA
  • fYear
    2007
  • fDate
    12-15 April 2007
  • Firstpage
    532
  • Lastpage
    535
  • Abstract
    Membrane proteins organize themselves in a linear fashion where adjacent cells are attached together along the basal-lateral region. Their intensity distributions are often heterogeneous and may lack specificity. Grouping of these linear structures can aid in segmentation and quantitative representation of protein localization. However, quantitative analysis of these signals is often hindered by noise, variation in scale, and perceptual features. This paper introduces an iterative voting method for inferring the membrane signal as it relates to continuity. A unique aspect of this technique is in the topography of the voting kernel, which is refined and reoriented iteratively. The technique can cluster and group membrane signals along the tangential direction. It has an excellent noise immunity and is tolerant to perturbations in scale. Application of this technique to quantitative analysis of cell-cell adhesion mediated by integral cell membrane proteins is demonstrated
  • Keywords
    adhesion; biomembranes; cellular biophysics; gynaecology; image segmentation; iterative methods; medical image processing; molecular biophysics; proteins; basal-lateral region; cell attachment; cell-based assays; cell-cell adhesion; integral cell membrane proteins; intensity distributions; iterative reorientation; iterative voting method; mammary epithelial cells; membrane proteins; membrane signals; noise immunity; perceptual grouping; protein localization; protein segmentation; voting kernel topography; Adhesives; Biomembranes; Cancer; Cells (biology); Kernel; Proteins; Shape; Solid modeling; Surfaces; Voting;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on
  • Conference_Location
    Arlington, VA
  • Print_ISBN
    1-4244-0672-2
  • Electronic_ISBN
    1-4244-0672-2
  • Type

    conf

  • DOI
    10.1109/ISBI.2007.356906
  • Filename
    4193340