• DocumentCode
    2574094
  • Title

    Poisson-Gaussian noise parameter estimation in fluorescence microscopy imaging

  • Author

    Jezierska, Anna ; Talbot, Hugues ; Chaux, Caroline ; Pesquet, Jean-Christophe ; Engler, Gilbert

  • Author_Institution
    LIGM, Univ. Paris-Est, Marne-la-Vallée, France
  • fYear
    2012
  • fDate
    2-5 May 2012
  • Firstpage
    1663
  • Lastpage
    1666
  • Abstract
    In this paper, we present a new fully automatic approach for noise parameter estimation in the context of fluorescence imaging systems. In particular, we address the problem of Poisson-Gaussian noise modeling in the nonstationary case. In microscopy practice, the nonstationarity is due to the photobleaching effect. The proposed method consists of an adequate moment based initialization followed by Expectation-Maximization iterations. This approach is shown to provide reliable estimates of the mean and the variance of the Gaussian noise and of the scale parameter of Poisson noise, as well as of the photobleaching rates. The algorithm performance is demonstrated on both synthetic and real macro confocal laser scanning microscope image sequences.
  • Keywords
    Gaussian noise; biomedical optical imaging; expectation-maximisation algorithm; fluorescence; image sequences; medical image processing; optical microscopy; optical saturable absorption; parameter estimation; physiological models; stochastic processes; Poisson-Gaussian noise modeling; Poisson-Gaussian noise parameter estimation; expectation-maximization iterations; fluorescence imaging systems; fluorescence microscopy imaging; fully automatic approach; macroconfocal laser scanning microscope image sequences; noise parameter estimation; photobleaching effect; Calibration; Estimation; Image reconstruction; Microscopy; Noise; Photobleaching; Expectation-Maximization algorithm; Noise identification; confocal imaging systems calibration; fluorescence photobleaching; image calibration;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on
  • Conference_Location
    Barcelona
  • ISSN
    1945-7928
  • Print_ISBN
    978-1-4577-1857-1
  • Type

    conf

  • DOI
    10.1109/ISBI.2012.6235897
  • Filename
    6235897