• DocumentCode
    2682209
  • Title

    Bolstered error estimator with feature selection

  • Author

    Sima, Chao ; Vu, Thang ; Braga-Neto, Ulisses M. ; Dougherty, Edward R.

  • Author_Institution
    Comput. Biol. Div., Translational Genomics Res. Inst., Phoenix, AZ, USA
  • fYear
    2009
  • fDate
    17-21 May 2009
  • Firstpage
    1
  • Lastpage
    2
  • Abstract
    Classification and error estimation are fundamental problems in genomic applications which are typically characterized by large numbers of variables and small numbers of samples. A previously proposed bolstered error estimator was found to work well in the small-sample settings with modest numbers of features not requiring feature selection. In this simulation study, we have improved the method for estimation of the bolstering kernels, which leads to an improved bolstered error estimator that has significantly reduced root mean square error compared to widely-accepted cross-validation error estimator, and performed well over a range of models and model complexities.
  • Keywords
    biology computing; genomics; bolstered error estimator; bolstering kernels; feature selection; genomics; Bioinformatics; Chaos; Computational biology; Computer errors; Covariance matrix; Error analysis; Error correction; Genomics; Kernel; Root mean square;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Genomic Signal Processing and Statistics, 2009. GENSIPS 2009. IEEE International Workshop on
  • Conference_Location
    Minneapolis, MN
  • Print_ISBN
    978-1-4244-4761-9
  • Electronic_ISBN
    978-1-4244-4762-6
  • Type

    conf

  • DOI
    10.1109/GENSIPS.2009.5174343
  • Filename
    5174343