• DocumentCode
    2876056
  • Title

    Fourier-based filtering approach for identification of protein- coding regions in DNA sequences

  • Author

    Das, Bihter ; Turkoglu, Ibrahim

  • Author_Institution
    Yazilim Muhendisligi Bolumu, Firat Univ., Elazığ, Turkey
  • fYear
    2015
  • fDate
    16-19 May 2015
  • Firstpage
    2529
  • Lastpage
    2532
  • Abstract
    Identification of protein-coding regions is very difficult in genomic research. This coding regions have 3-base periodicity are named as exon. The aim of this paper is to estimate position of exon in the DNA sequence used filter approach based Fourier. For this purpose, DNA sequences of M8694 gene in human species are transformed to numeric sequences by EIIP mapping technique. Time frequency domain of numeric DNA sequences is obtained by Fourier method and 3-period signal is filtered using antinotch filter. Exon regions of filtered signal are defined successfully according to the specified percentile threshold.
  • Keywords
    DNA; Fourier transforms; biology computing; filtering theory; medical signal processing; DNA sequence used filter approach; EIIP mapping technique; Fourier-based filtering approach; exon regions; genomic research; protein-coding regions identification; Bioinformatics; DNA; Encoding; Filtering; Genomics; Protein engineering; Proteins; Antinotch filter; DNA sequence; Exon; Fourier transform;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Signal Processing and Communications Applications Conference (SIU), 2015 23th
  • Conference_Location
    Malatya
  • Type

    conf

  • DOI
    10.1109/SIU.2015.7130399
  • Filename
    7130399