DocumentCode
2887969
Title
Molecular dynamics on transputer arrays
Author
Perram, John W. ; Petersen, Henrik G.
Author_Institution
Dept. of Mathj. & Comput. Sci., Odense Univ., Denmark
fYear
1990
fDate
7-9 Mar 1990
Firstpage
550
Abstract
The implementation of a molecular dynamics simulation on a 10 transputer system is reported. The implementation exploits fully the geometric parallelism of the problem. A simple model of the computing and communications overheads leads to predictions of the optimal scaling of the problem size with the number of processors. The implementation exploits fully the domain decomposition paradigm in which load balancing is guaranteed by the compressibility theorem of statistical mechanics
Keywords
digital simulation; parallel processing; physics computing; communications overheads; compressibility theorem; computing overheads; domain decomposition paradigm; geometric parallelism; load balancing; molecular dynamics simulation; optimal scaling; statistical mechanics; transputer arrays; Boundary conditions; Computational modeling; Computer architecture; Computer science; Computer simulation; Load management; Mathematics; Parallel processing; Predictive models; Slabs;
fLanguage
English
Publisher
ieee
Conference_Titel
Databases, Parallel Architectures and Their Applications,. PARBASE-90, International Conference on
Conference_Location
Miami Beach, FL
Print_ISBN
0-8186-2035-8
Type
conf
DOI
10.1109/PARBSE.1990.77216
Filename
77216
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