• DocumentCode
    2891278
  • Title

    Promoting Ranking Diversity for Biomedical Information Retrieval Based on LDA

  • Author

    Chen, Yan ; Yin, Xiaoshi ; Li, Zhoujun ; Hu, Xiaohua ; Huang, Jimmy Xiangji

  • Author_Institution
    State Key Lab. of Software Dev. Environ., Beihang Univ., Beijing, China
  • fYear
    2011
  • fDate
    12-15 Nov. 2011
  • Firstpage
    456
  • Lastpage
    461
  • Abstract
    In this paper, we propose an approach based on a topic generative model called Latent Dirichlet Allocation (LDA) to promoting ranking diversity for biomedical information retrieval. Different from other approaches or models which consider aspects on word level, our approach assumes that aspects should be identified by the topics of retrieved documents. We present LDA model to discover topic distribution of retrieval passages and word distribution of each topic dimension, and then re-rank retrieval results with topic distribution similarity between passages based on JV-size slide window. Experiments on TREC 2007 Genomics collection and two distinctive IR baseline runs demonstrate the effectiveness of our method in promoting ranking diversity for biomedical information retrieval. Evaluation results show that our approach can achieve 8% improvement over the highest Aspect MAP reported in TREC 2007 Genomics track.
  • Keywords
    information retrieval; medical computing; statistics; IR baseline; JV-size slide window; LDA model; TREC 2007 Genomics collection; biomedical information retrieval; latent Dirichlet allocation; ranking diversity promotion; retrieval passage topic distribution; topic dimension word distribution; topic generative model; word level; Bioinformatics; Biological system modeling; Educational institutions; Genomics; Information retrieval; LDA; biomedical IR; ranking diversity;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedicine (BIBM), 2011 IEEE International Conference on
  • Conference_Location
    Atlanta, GA
  • Print_ISBN
    978-1-4577-1799-4
  • Type

    conf

  • DOI
    10.1109/BIBM.2011.28
  • Filename
    6120485