DocumentCode
3068905
Title
Leveraging genetic algorithm and neural network in automated protein crystal recognition
Author
Po, Ming Jack ; Laine, Andrew F.
Author_Institution
Department of Biomedical Engineering, Columbia University, New York, 10027 USA
fYear
2008
fDate
20-25 Aug. 2008
Firstpage
1926
Lastpage
1929
Abstract
We propose a classification framework combined with a multi-scale image processing method for recognizing protein crystals in high-throughput images. The main three points of the processing method are the multiple population genetic algorithm for region of interest detection, multi-scale Laplacian pyramid filters and histogram analysis techniques to find an effective feature vector. Using human (expert crystallographers) classified images as ground truth, the current experimental results gave 88% true positive and 99% true negative rates, resulting in an average true performance of ∼93.5% validated on an image database which contained over 79,000 images.
Keywords
Algorithm design and analysis; Crystals; Filters; Genetic algorithms; Histograms; Image processing; Image recognition; Laplace equations; Neural networks; Proteins; Algorithms; Biomedical Engineering; Crystallization; Expert Testimony; Neural Networks (Computer); Proteins; Software Design;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE
Conference_Location
Vancouver, BC
ISSN
1557-170X
Print_ISBN
978-1-4244-1814-5
Electronic_ISBN
1557-170X
Type
conf
DOI
10.1109/IEMBS.2008.4649564
Filename
4649564
Link To Document