• DocumentCode
    3068905
  • Title

    Leveraging genetic algorithm and neural network in automated protein crystal recognition

  • Author

    Po, Ming Jack ; Laine, Andrew F.

  • Author_Institution
    Department of Biomedical Engineering, Columbia University, New York, 10027 USA
  • fYear
    2008
  • fDate
    20-25 Aug. 2008
  • Firstpage
    1926
  • Lastpage
    1929
  • Abstract
    We propose a classification framework combined with a multi-scale image processing method for recognizing protein crystals in high-throughput images. The main three points of the processing method are the multiple population genetic algorithm for region of interest detection, multi-scale Laplacian pyramid filters and histogram analysis techniques to find an effective feature vector. Using human (expert crystallographers) classified images as ground truth, the current experimental results gave 88% true positive and 99% true negative rates, resulting in an average true performance of ∼93.5% validated on an image database which contained over 79,000 images.
  • Keywords
    Algorithm design and analysis; Crystals; Filters; Genetic algorithms; Histograms; Image processing; Image recognition; Laplace equations; Neural networks; Proteins; Algorithms; Biomedical Engineering; Crystallization; Expert Testimony; Neural Networks (Computer); Proteins; Software Design;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE
  • Conference_Location
    Vancouver, BC
  • ISSN
    1557-170X
  • Print_ISBN
    978-1-4244-1814-5
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2008.4649564
  • Filename
    4649564