• DocumentCode
    3083727
  • Title

    Research on the Application of Pattern Selection Algorithm in Bioinformatic Data Bases on Mutual Information

  • Author

    Li, Xin ; Hong, Wenxue ; Zhao, Chun

  • Author_Institution
    Inst. of Biomed. Eng., Yanshan Univ., Qinhuangdao, China
  • fYear
    2010
  • fDate
    17-19 Sept. 2010
  • Firstpage
    1022
  • Lastpage
    1025
  • Abstract
    Pattern selection is an important part in the research fields of data mining and pattern recognition, especially for the high-dimensional data in the Bioinformatics. In this paper, a new pattern selection algorithm was proposed to finish pattern selection bases on Mutual Information. Pattern subset evaluation index was researched to ensure the best feature subset was selected. The algorithm bases on the correlation of patterns and label, as well as the redundancy between the patterns. Fuzzy Pattern Subset Evaluation Index was researched to make sure which is the best subset for the pattern subset evaluation. To verify the effectiveness of the method, some experiments were finished with the data of gene expression data (Leiden University) and UCI datasets. The experimental results indicate that the algorithm achieved better results.
  • Keywords
    bioinformatics; data mining; database management systems; pattern classification; set theory; Leiden University; UCI dataset; bioinformatic database; data mining; fuzzy pattern subset evaluation index; gene expression data; mutual information; pattern recognition; pattern selection algorithm; Bioinformatics; Classification algorithms; Gene expression; Indexes; Mutual information; Pattern recognition; Redundancy; Bioinformatics; Feature Selection; Mutual Information; Pattern Selection;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Pervasive Computing Signal Processing and Applications (PCSPA), 2010 First International Conference on
  • Conference_Location
    Harbin
  • Print_ISBN
    978-1-4244-8043-2
  • Electronic_ISBN
    978-0-7695-4180-8
  • Type

    conf

  • DOI
    10.1109/PCSPA.2010.252
  • Filename
    5635668