DocumentCode
3417821
Title
The application of feature selection methods to analyze the tissue microarray data
Author
Lin, Weipeng ; Liu, Kunhong ; Liu, Guoyan
Author_Institution
Software Sch., Xiamen Univ., Xiamen, China
fYear
2011
fDate
19-21 Oct. 2011
Firstpage
455
Lastpage
460
Abstract
In this paper, two feature selection methods, binary genetic algorithm (GA) and sequential floating forward selection (SFFS), were deployed to analyze tissue microarray dataset. The tissue microarray materials in our experiments consisted of 15 tumor-related genes in histological normal tissues adjacent to clinic tumors and different tumors, and the data were arranged in three different datasets and all the collection works were done by the Affiliated Zhongshan Hospital of Xiamen University. For each dataset, we used three distinguished classifiers to obtain the AUC of receive operating characteristic (ROC) curve. The experimental results showed that both feature selection methods could lead to reliable and accuracy results, and be used to discover the connection of genes and cancers.
Keywords
biological tissues; cancer; data analysis; genetic algorithms; medical computing; pattern classification; Affiliated Zhongshan Hospital; ROC curve; Xiamen University; binary genetic algorithm; cancer; clinic tumors; feature selection method; gene connection; histological normal tissues; receive operating characteristic; sequential floating forward selection; tissue microarray data analysis; tissue microarray materials; tumor-related genes; Accuracy; Benign tumors; Biological tissues; Frequency control; Genetic algorithms; Malignant tumors;
fLanguage
English
Publisher
ieee
Conference_Titel
Advanced Computational Intelligence (IWACI), 2011 Fourth International Workshop on
Conference_Location
Wuhan
Print_ISBN
978-1-61284-374-2
Type
conf
DOI
10.1109/IWACI.2011.6160050
Filename
6160050
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