• DocumentCode
    3504764
  • Title

    Spherical Polar Fourier EAP and odf reconstruction via compressed sensing in diffusion mri

  • Author

    Merlet, Sylvain ; Cheng, Jian ; Ghosh, Aurobrata ; Deriche, Rachid

  • Author_Institution
    Athena Project-Team, INRIA Sophia Antipolis-Mediterranee, Sophia Antipolis, France
  • fYear
    2011
  • fDate
    March 30 2011-April 2 2011
  • Firstpage
    365
  • Lastpage
    371
  • Abstract
    In diffusion magnetic resonance imaging (dMRI), the Ensemble Average Propagator (EAP), also known as the propagator, describes completely the water molecule diffusion in the brain white matter without any prior knowledge about the tissue shape. In this paper, we describe a new and efficient method to accurately reconstruct the EAP in terms of the Spherical Polar Fourier (SPF) basis from very few diffusion weighted magnetic resonance images (DW-MRI). This approach nicely exploits the duality between SPF and a closely related basis in which one can respectively represent the EAP and the diffusion signal using the same coefficients, and efficiently combines it to the recent acquisition and reconstruction technique called Compressed Sensing (CS). Our work provides an efficient analytical solution to estimate, from few measurements, the diffusion propagator at any radius. We also provide a new analytical solution to extract an important feature characterising the tissue microstructure: the Orientation Distribution Function (ODF). We illustrate and prove the effectiveness of our method in reconstructing the propagator and the ODF on both noisy multiple q-shell synthetic and phantom data.
  • Keywords
    Fourier analysis; biological tissues; biomedical MRI; data acquisition; feature extraction; medical image processing; phantoms; ODF reconstruction; brain white matter; compressed sensing; data acquisition; diffusion MRI; diffusion magnetic resonance imaging; diffusion signal; diffusion weighted magnetic resonance images; ensemble average propagator; feature extraction; phantom; spherical polar Fourier EAP; tissue microstructure; water molecule diffusion; Compressed sensing; Equations; Feature extraction; Fourier transforms; Image reconstruction; Mathematical model; Compressed sensing; Diffusion MRI; EnsembleAverage Propagator recovery; Orientation Distribution Function; Propagator; Spherical Polar Fourier;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on
  • Conference_Location
    Chicago, IL
  • ISSN
    1945-7928
  • Print_ISBN
    978-1-4244-4127-3
  • Electronic_ISBN
    1945-7928
  • Type

    conf

  • DOI
    10.1109/ISBI.2011.5872425
  • Filename
    5872425