DocumentCode
3504764
Title
Spherical Polar Fourier EAP and odf reconstruction via compressed sensing in diffusion mri
Author
Merlet, Sylvain ; Cheng, Jian ; Ghosh, Aurobrata ; Deriche, Rachid
Author_Institution
Athena Project-Team, INRIA Sophia Antipolis-Mediterranee, Sophia Antipolis, France
fYear
2011
fDate
March 30 2011-April 2 2011
Firstpage
365
Lastpage
371
Abstract
In diffusion magnetic resonance imaging (dMRI), the Ensemble Average Propagator (EAP), also known as the propagator, describes completely the water molecule diffusion in the brain white matter without any prior knowledge about the tissue shape. In this paper, we describe a new and efficient method to accurately reconstruct the EAP in terms of the Spherical Polar Fourier (SPF) basis from very few diffusion weighted magnetic resonance images (DW-MRI). This approach nicely exploits the duality between SPF and a closely related basis in which one can respectively represent the EAP and the diffusion signal using the same coefficients, and efficiently combines it to the recent acquisition and reconstruction technique called Compressed Sensing (CS). Our work provides an efficient analytical solution to estimate, from few measurements, the diffusion propagator at any radius. We also provide a new analytical solution to extract an important feature characterising the tissue microstructure: the Orientation Distribution Function (ODF). We illustrate and prove the effectiveness of our method in reconstructing the propagator and the ODF on both noisy multiple q-shell synthetic and phantom data.
Keywords
Fourier analysis; biological tissues; biomedical MRI; data acquisition; feature extraction; medical image processing; phantoms; ODF reconstruction; brain white matter; compressed sensing; data acquisition; diffusion MRI; diffusion magnetic resonance imaging; diffusion signal; diffusion weighted magnetic resonance images; ensemble average propagator; feature extraction; phantom; spherical polar Fourier EAP; tissue microstructure; water molecule diffusion; Compressed sensing; Equations; Feature extraction; Fourier transforms; Image reconstruction; Mathematical model; Compressed sensing; Diffusion MRI; EnsembleAverage Propagator recovery; Orientation Distribution Function; Propagator; Spherical Polar Fourier;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on
Conference_Location
Chicago, IL
ISSN
1945-7928
Print_ISBN
978-1-4244-4127-3
Electronic_ISBN
1945-7928
Type
conf
DOI
10.1109/ISBI.2011.5872425
Filename
5872425
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