• DocumentCode
    3646660
  • Title

    Modeling enzymatic reactions via chemical Langevin-Levy equation

  • Author

    Mustafa A. Altınkaya;Ercan E. Kuruoğlu

  • Author_Institution
    Elektrik-Elektronik Mü
  • fYear
    2012
  • fDate
    4/1/2012 12:00:00 AM
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    Chemical Langevin Equation (CLE) describes a useful approximation in stochastic modeling of chemical reactions. CLE-based τ-leaping algorithm updates the quantities of every molecule in a reaction system with a period of τ, firing every reaction in the system so many times that the concentration of each molecule can be assumed to remain in the current concentration state. Substituting the Brownian motion in the CLE with a Levy flight, one might expect the CLE to converge more rapidly. This work shows that alpha (Levy)-stable increments can be used in τ-leaping, demonstrating it with the example of a detailed kinetic model describing the enzymatic transgalactosylation reaction during lactulose hydrolysis.
  • Keywords
    "Mathematical model","Chemicals","Equations","Stochastic processes","Kinetic theory","Biological system modeling"
  • Publisher
    ieee
  • Conference_Titel
    Signal Processing and Communications Applications Conference (SIU), 2012 20th
  • Print_ISBN
    978-1-4673-0055-1
  • Type

    conf

  • DOI
    10.1109/SIU.2012.6204746
  • Filename
    6204746