• DocumentCode
    3850889
  • Title

    On Parameter Synthesis by Parallel Model Checking

  • Author

    Jiri Barnat;Lubos Brim;Adam Krejci;Adam Streck;David Safranek;Martin Vejnar;Tomas Vejpustek

  • Author_Institution
    Masaryk University, Brno
  • Volume
    9
  • Issue
    3
  • fYear
    2012
  • Firstpage
    693
  • Lastpage
    705
  • Abstract
    An important problem in current computational systems biology is to analyze models of biological systems dynamics under parameter uncertainty. This paper presents a novel algorithm for parameter synthesis based on parallel model checking. The algorithm is conceptually universal with respect to the modeling approach employed. We introduce the algorithm, show its scalability, and examine its applicability on several biological models.
  • Keywords
    "Biological system modeling","Computational modeling","Algorithm design and analysis","Cost accounting","Kinetic theory"
  • Journal_Title
    IEEE/ACM Transactions on Computational Biology and Bioinformatics
  • Publisher
    ieee
  • ISSN
    1545-5963
  • Type

    jour

  • DOI
    10.1109/TCBB.2011.110
  • Filename
    5963639