• DocumentCode
    419570
  • Title

    Feature selection and gene clustering from gene expression data

  • Author

    Mitra, Pabitra ; Majumder, Dwijesh Dutta

  • Author_Institution
    Machine Intelligence Unit, Indian Stat. Inst., Kolkata, India
  • Volume
    2
  • fYear
    2004
  • fDate
    23-26 Aug. 2004
  • Firstpage
    343
  • Abstract
    In This work we describe an algorithm for feature selection and gene clustering from high dimensional gene expression data. The method is based on measuring similarity between features/genes whereby redundancy therein is removed. This does not need any search and therefore is fast. A novel feature similarity measure, called maximum information compression index, is used. The feature selection algorithm also obtains gene clusters in a multiscale fashion. The superiority of the algorithm, in terms of speed and performance, is established on a real life molecular cancer classification dataset.
  • Keywords
    biology computing; feature extraction; genetics; optimisation; pattern clustering; feature selection; feature similarity measure; gene clustering; gene expression data; maximum information compression index; molecular cancer classification dataset; Cancer; Clustering algorithms; Data mining; Entropy; Gene expression; Inference algorithms; Machine intelligence; Partitioning algorithms; Random variables; Reactive power;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Pattern Recognition, 2004. ICPR 2004. Proceedings of the 17th International Conference on
  • ISSN
    1051-4651
  • Print_ISBN
    0-7695-2128-2
  • Type

    conf

  • DOI
    10.1109/ICPR.2004.1334213
  • Filename
    1334213