• DocumentCode
    495323
  • Title

    Classfication and Evolution of HLH Family Members in Poultry Genome

  • Author

    Han, Chunchun ; Wang, Wei ; Wang, Jiwen ; Li, Liang

  • Author_Institution
    Key Lab. of Animal Genetic Resources, Sichuan Agric. Univ., Ya´´an, China
  • Volume
    6
  • fYear
    2009
  • fDate
    March 31 2009-April 2 2009
  • Firstpage
    301
  • Lastpage
    306
  • Abstract
    Based on the amino acid sequence of bHLH-zip motif in SREBP-1 and SREBP-2 in Landes goose obtained by gene cloning, the sequences of HLH family members in poultry genome were screened in the Protein Databases of NCBI. The classification and evolution of HLH protein family in poultry genome were analyzed. HLH protein family in poultry genome are divided into five groups (A, B, C, D and E) according to the sequence features of bHLH domain. The result of phylogenetic development indicates the sequences of HLH family members in poultry genome also gather into five groups, and this grouping is generally consistent with the classification by sequence features. Group B diverges from other groups firstly, and the divergent time of group A is the latest. Groups A and D have closer genetic relationship, and groups C and E have closer phylogenetic relationship.
  • Keywords
    data analysis; farming; genetics; proteins; HLH family members; HLH protein family; Landes goose; SREBP-1; SREBP-2; amino acid sequence; bHLH-zip motif; gene cloning; phylogenetic development; phylogenetic relationship; poultry genome; protein databases; sequence features; Animals; Bioinformatics; Cloning; Genetics; Genomics; Humans; Phylogeny; Proteins; Sequences; Spatial databases; Classfication; Evolution; Key words: HLH; Poultry genome;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computer Science and Information Engineering, 2009 WRI World Congress on
  • Conference_Location
    Los Angeles, CA
  • Print_ISBN
    978-0-7695-3507-4
  • Type

    conf

  • DOI
    10.1109/CSIE.2009.33
  • Filename
    5170709