DocumentCode
54721
Title
Functional Impact of Autophagy-Related Genes on the Homeostasis and Dynamics of Pancreatic Cancer Cell Lines
Author
Mazza, Tommaso ; Fusilli, Caterina ; Saracino, Chiara ; Mazzoccoli, Gianluigi ; Tavano, Francesca ; Vinciguerra, Manlio ; Pazienza, Valerio
Author_Institution
Bioinf. Unit, IRCCS Casa Sollievo della Sofferenza-Mendel, Rome, Italy
Volume
12
Issue
3
fYear
2015
fDate
May-June 1 2015
Firstpage
667
Lastpage
678
Abstract
Pancreatic cancer is a highly aggressive and chemotherapy-resistant malignant neoplasm. In basal condition, it is characterized by elevated autophagy activity, which is required for tumor growth and that correlates with treatment failure. We analyzed the expression of autophagy related genes in different pancreatic cancer cell lines. A correlation-based network analysis evidenced the sociality and topological roles of the autophagy-related genes after serum starvation. Structural and functional tests identified a core set of autophagy related genes, suggesting different scenarios of autophagic responses to starvation, which may be responsible for the clinical variations associated with pancreatic cancer pathogenesis.
Keywords
cancer; cellular biophysics; genetics; tumours; autophagic responses; autophagy-related genes; chemotherapy-resistant malignant neoplasm; correlation-based network analysis; elevated autophagy activity; functional tests; homeostasis; pancreatic cancer cell lines; pancreatic cancer pathogenesis; serum starvation; structural tests; tumor growth; Bioinformatics; Cancer; Computational biology; Correlation; IEEE transactions; Modulation; Tumors; Autophagy; Network topology; Pancreatic cancer; Starvation; network topology; pancreatic cancer; starvation;
fLanguage
English
Journal_Title
Computational Biology and Bioinformatics, IEEE/ACM Transactions on
Publisher
ieee
ISSN
1545-5963
Type
jour
DOI
10.1109/TCBB.2014.2371824
Filename
6965612
Link To Document