• DocumentCode
    982379
  • Title

    Filtering for Nonlinear Genetic Regulatory Networks With Stochastic Disturbances

  • Author

    Wang, Zidong ; Lam, James ; Wei, Guoliang ; Fraser, Karl ; Liu, Xiaohui

  • Author_Institution
    Dept. of Inf. Syst. & Comput., Brunel Univ., Uxbridge
  • Volume
    53
  • Issue
    10
  • fYear
    2008
  • Firstpage
    2448
  • Lastpage
    2457
  • Abstract
    In this paper, the filtering problem is investigated for nonlinear genetic regulatory networks with stochastic disturbances and time delays, where the nonlinear function describing the feedback regulation is assumed to satisfy the sector condition, the stochastic perturbation is in the form of a scalar Brownian motion, and the time delays exist in both the translation process and the feedback regulation process. The purpose of the addressed filtering problem is to estimate the true concentrations of the mRNA and protein. Specifically, we are interested in designing a linear filter such that, in the presence of time delays, stochastic disturbances as well as sector nonlinearities, the filtering dynamics of state estimation for the stochastic genetic regulatory network is exponentially mean square stable with a prescribed decay rate lower bound beta. By using the linear matrix inequality (LMI) technique, sufficient conditions are first derived for ensuring the desired filtering performance for the gene regulatory model, and the filter gain is then characterized in terms of the solution to an LMI, which can be easily solved by using standard software packages. A simulation example is exploited in order to illustrate the effectiveness of the proposed design procedures.
  • Keywords
    Brownian motion; asymptotic stability; biology computing; delays; estimation theory; feedback; filtering theory; genetics; linear matrix inequalities; nonlinear functions; proteins; stochastic processes; decay rate lower bound; exponential mean square stability; feedback regulation process; filtering problem; linear filter design; linear matrix inequality technique; mRNA concentration estimation; nonlinear function; nonlinear genetic regulatory network; protein concentration estimation; scalar Brownian motion; software package; state estimation; stochastic disturbance; time delay; translation process; Delay effects; Feedback; Filtering; Genetics; Linear matrix inequalities; Nonlinear filters; Proteins; State estimation; Stochastic processes; Sufficient conditions; Decay rate; gene expression; genetic regulatory network; stochastic disturbance; time-delay;
  • fLanguage
    English
  • Journal_Title
    Automatic Control, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9286
  • Type

    jour

  • DOI
    10.1109/TAC.2008.2007862
  • Filename
    4668532