Author/Authors :
Sikdar، نويسنده , , Samapan and Ghosh، نويسنده , , Mahua and De Raychaudhury، نويسنده , , Molly and Chakrabarti، نويسنده , , J.، نويسنده ,
Abstract :
We perform density functional theory (DFT) based quantum chemical calculations on calcium ion coordination to an isolated loop of Calmodulin. We show that the coordination molecular orbitals in the ground state, having contributions from the valence orbitals of the metal ion and the loop atoms, bring out the roles of the coordinating and the non-coordinating residues to stabilize the coordination geometry in agreement to the mutational studies. The coordinating molecular orbitals are observed to be robust under various truncations of the binding loop and capping at the terminal residues.