Author/Authors :
Xu، نويسنده , , Shuang and Zhao، نويسنده , , Dong-Xia and Gong، نويسنده , , Li-dong and Liu، نويسنده , , Cui and Yang، نويسنده , , Zhong-Zhi، نويسنده ,
Abstract :
ABEEMσπ polarizable force field (PFF) with fluctuating charges works well for searching stable conformations of Val-dipeptide and Val-tripeptide, showing importance of the polarization. The results demonstrate that ABEEMσπ PFF is able to search out all the 6 types of stable conformations of Val-dipeptide and 34 types of stable conformations of Val-tripeptide that are just all exactly found by the calculations of ab initio B3LYP/6-311++G(d,p) and MP2/6-311++G(d,p) methods. In contrast, the force fields with the fixed-charges (FC), such as ABEEMσπ-FC, AMBER-FC 99sb and OPLS/AA-FC force fields can only search out less or much less numbers of stable conformations for them.