Title of article :
Direct Sequencing of Cyclooxygenase-2 (COX-2) Revealed an Intronic Variant rs201231411 in Iranian Patients with Pancreatic Cancer
Author/Authors :
Mohamadkhani, Ashraf Liver and Pancreatobiliary Diseases Research Institute , Akbari, Mohammad Reza Research Institute - Tehran University of Medical Sciences , Ghanbari, Reza Liver and Pancreatobiliary Diseases Research Institute , Naderi, Elnaz Liver and Pancreatobiliary Diseases Research Institute , Rezanejad-Asl, Parisa Dalla Lana School of Public Health - University of Toronto , Pourshams, Akram Liver and Pancreatobiliary Diseases Research Institute
Pages :
5
From page :
14
To page :
18
Abstract :
BACKGROUND There are hoarding documents for the biological importance of cyclooxygenase- 2 (COX-2) in pancreatic carcinogenesis. We aimed to thoroughly investigate the DNA sequence variations of whole COX-2 exons in a large casecontrol study of pancreatic cancer by direct sequencing. METHODS The entire exonic regions of COX-2 including 10 exons were sequenced in the germline DNA of 96 patients with pancreatic cancer. Selected variants within exons six to seven (E6E7) amplicon from the test panel were genotyped in 96 controls. RESULTS The COX-2 gene was demonstrated to be genetically conserved. Four missense mutations were found in three cases. However the common variant c.724-10_724-7delATTT (rs201231411) that is located in intron 6, showed significant difference between cases and controls (21 [21.9%] vs 11 [%11.5], p=0.05). CONCLUSION This study determined that COX-2 has a conservative sequence, which is required for its enzymatic activity and supports the important role of this enzyme’s expression in pancreatic cancer rather than any changes in its activity. The effect of intronic variant rs201231411 on COX-2 expression could be analyzed in future studies.
Keywords :
Genome sequencing , Pancreatic cancer , Cyclooxygenase-2 (COX-2)
Journal title :
Astroparticle Physics
Serial Year :
2015
Record number :
2416270
Link To Document :
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