Title of article :
Frequency of HNF4A-P.I463V Variant in the Tunisian North-African Population and Its Relation with Diabetes Mellitus
Author/Authors :
AMARA, Abdelbasset Laboratory of Human Cytogenetics - Molecular Genetics and Reproductive Biology - Farhat Hached University Hospital, Sousse, Tunisia , BEN CHARFEDDINE, Ilhem Laboratory of Human Cytogenetics - Molecular Genetics and Reproductive Biology - Farhat Hached University Hospital, Sousse, Tunisia , GHÉDIR, Houda Laboratory of Human Cytogenetics - Molecular Genetics and Reproductive Biology - Farhat Hached University Hospital, Sousse, Tunisia , MAMAÏ, Ons Laboratory of Human Cytogenetics - Molecular Genetics and Reproductive Biology - Farhat Hached University Hospital, Sousse, Tunisia , JEMNI-YACOUB, Saloua Regional Center of Blood Transfusion of Sousse, Sousse, Tunisi , CHAIEB, Larbi Dept. of Endocrinology and Diabetology - Farhat Hached University Hospital, Sousse, Tunisia , SAAD, Ali Laboratory of Human Cytogenetics - Molecular Genetics and Reproductive Biology - Farhat Hached University Hospital, Sousse, Tunisia , CHADLI-CHAIEB, Molka Dept. of Endocrinology and Diabetology - Farhat Hached University Hospital, Sousse, Tunisia , GRIBAA, Moez Laboratory of Human Cytogenetics - Molecular Genetics and Reproductive Biology - Farhat Hached University Hospital, Sousse, Tunisia
Pages :
8
From page :
396
To page :
403
Abstract :
Background: HNF4A-p.I463Vvariant, reported previously in two distinct families suspected of MODY-1, is assessed in this report to determine whether it is a mutation or a polymorphism (frequency >1%). Methods: 200 Tunisian healthy people were screened for the presence of HNF4A-p.I463V variant, using RFLP-PCR technique and sequencing. Then, the frequency of this variant was estimated in the Tunisian population and compared to other populations registered in genetic databases. We also performed in-silico analysis using PolyPhen2 and Mutation T@sting softwares to assess the probable effect of HNF4A-p.I463V variant. Results: HNF4A-p.I463V had a rare frequency in different populations and was found in 3 control subjects (1.5%) of the studied population. PolyPhen2 predicted that it is a polymorphism, whereas mutation T@sting suggested a proba-bly affected mutant protein. Conclusion: HNF4A-p.I463V has a relatively high frequency (>1%) in our control cohort. It is also present in differ-ent ethnicities and in- silico analysis showed conflicting results. For these reasons, HNF4A-p.I463V should not be con-sidered as a mutation responsible for MODY-1.
Keywords :
MODY , HNF4A-p.I463V , Polymorphism , Mutation , Tunisia , in-silico , Type 2 diabetes , rs147638455
Journal title :
Astroparticle Physics
Serial Year :
2015
Record number :
2420228
Link To Document :
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