Title of article :
Identification of the Key Genes of Autism Spectrum Disorder Through Protein-Protein Interaction Network
Author/Authors :
Zamanian Azodi, Mona Proteomics Research Center - Shahid Beheshti University of Medical Sciences , Rezaei Tavirani, Mostafa Proteomics Research Center - Shahid Beheshti University of Medical Sciences , Rezaei Tavirani, Majid Dept of Medicine - Iran University of Medical Sciences
Abstract :
Background: Currently, the prevalence of autism spectrum disorder (ASD) is increasing, which
widely spurs the interest in the molecular investigation. Thereby, a better understanding of the
given disorder mechanisms is likely to be achieved. Bioinformatics suiting protein-protein interactions analysis via the application of high-throughput studies, such as protein array, is one of
these achievements.Materials and Methods: The gene expression data from Gene Expression
Omnibus (GEO) database were downloaded, and the expression profile of patients with developmental delay and autistic features were analyzed via Cytoscape and its relevant plug-ins.Results: Our findings indicated that EGFR, ACTB, RHOA, CALM1, MAPK1, and JUN genes as
the hub-bottlenecks and their related terms could be important in ASD risk. In other words, any
expression modification in these genes could trigger dysfunctions in the corresponding biological processes.Conclusion: We suggest that differentially expressed genes could be used as suitable targets for ASD after being validated.
Keywords :
Autism Spectrum Disorder , Transcriptome , Protein Interaction Maps , Gene Ontology
Journal title :
Galen Medical Journal (GMJ)