Title of article :
Molecular diversity of thermophilic bacteria isolated from Pasinler hot spring (Erzurum, Turkey)
Author/Authors :
ADIGÜZEL, Ahmet Atatürk University - Faculty of Science - Department of Molecular Biology and Genetics, TURKEY , İNAN, Kadriye Karadeniz Technical University - Faculty of Sciences - Department of Biology, Turkey , ŞAHİN, Fikrettin Yeditepe University - Faculty of Engineering and Architecture - Department of Genetics and Bioengineering, TURKEY , ARASOĞLU, Tulin Ministry of Health Turkey - İstanbul Regional Hygiene Institute, TURKEY , GÜLLÜCE, Medine Atatürk University - Faculty of Arts and Science - Department of Biology, TURKEY , BELDÜZ, Ali Osman Karadeniz Technical University - Faculty of Sciences - Department of Biology, Turkey , BARIŞ, Özlem Atatürk University - Faculty of Arts and Science - Department of Biology, TURKEY
Abstract :
The present study was conducted to determine the phenotypic and genotypic characterization of thermophilic bacteria isolated from Pasinler hot spring, Erzurum, Turkey. Fatty acid profi les, BOX PCR fingerprints, and 16S rDNA sequence data were used for the phenotypic and genotypic characterization of thermophilic bacteria. Totally 9 diff erent bacterial strains were selected based on morphological, physiological, and biochemical tests. These strains were characterized by molecular tests including fatty acid and BOX profi les, and 16S rDNA sequence. The data of fatty acid analysis showed the presence of 14 different fatty acids in the 9 bacterial strains examined. Additionally, 5 of these fatty acids, 15:0 iso, 15:0 anteiso, 16:0 iso, 17:0 iso, and 17:0 anteiso fatty acids, were found in all isolates. Based on fatty acid profi les, it was determined that the bacterial strains were classified into 2 phenotypic groups, and these data were confirmed by BOX PCR genomic fi ngerprint profi les and 16S rDNA sequence analysis. The first group, identified as Bacillus licheniformis, was represented by 4 strains, and the second group, identified as Aeribacillus pallidus, was represented by 5 strains.
Keywords :
Thermophile bacteria , FAMEs , BOX , PCR , 16S rDNA sequencing
Journal title :
Turkish Journal of Biology
Journal title :
Turkish Journal of Biology