Title of article :
CUL1-Mediated Organelle Fission Pathway Inhibits the Development of Chronic Obstructive Pulmonary Disease
Author/Authors :
Li, Ran Department of Critical Care Medicine - Henan University Huaihe Hospital - Gulou District - Kaifeng, China , Xu, Feng Department of Respiratory and Critical Care Medicine - Henan University Huaihe Hospital - Gulou District - Kaifeng, China , Wu, Xiao Department of Respiratory and Critical Care Medicine - Henan University Huaihe Hospital - Gulou District - Kaifeng, China , Ji, Shaoping School of Basic Medical Sciences - Henan University - Kaifeng, China , Xia, Ruixue Department of Respiratory and Critical Care Medicine - Henan University Huaihe Hospital - Gulou District - Kaifeng, China
Abstract :
Chronic obstructive pulmonary disease (COPD) is a global high-incidence chronic airway inflammation disease. Its deterioration
will lead to more serious lung lesions and even lung cancer. Therefore, it is urgent to determine the pathogenesis of COPD and find
potential therapeutic targets. The purpose of this study is to reveal the molecular mechanism of COPD disease development
through in-depth analysis of transcription factors and ncRNA-driven pathogenic modules of COPD. We obtained the
expression profile of COPD-related microRNAs from the NCBI-GEO database and analyzed the differences among groups to
identify the microRNAs significantly associated with COPD. Then, their target genes are predicted and mapped to a proteinprotein interaction (PPI) network. Finally, key transcription factors and the ncRNA of the regulatory module were identified
based on the hypergeometric test. The results showed that CUL1 was the most interactive gene in the highly interactive module,
so it was recognized as a dysfunctional molecule of COPD. Enrichment analysis also showed that it was much involved in the
biological process of organelle fission, the highest number of regulatory modules. In addition, ncRNAs, mainly composed of
miR-590-3p, miR-495-3p, miR-186-5p, and transcription factors such as MYC, BRCA1, and CDX2, significantly regulate COPD
dysfunction blocks. In summary, we revealed that the COPD-related target gene CUL1 plays a key role in the potential
dysfunction of the disease. It promotes the proliferation of fibroblast cells in COPD patients by mediating functional signals of
organelle fission and thus participates in the progress of the disease. Our research helps biologists to further understand the
etiology and development trend of COPD.
Keywords :
CUL1-Mediated , Pulmonary , Chronic , COPD
Journal title :
Computational and Mathematical Methods in Medicine