Title of article :
Network Structure Analysis Identifying Key Genes of Autism and Its Mechanism
Author/Authors :
Wang, Yanhui Shandong University of Science and Technology - Qingdao, China , Kou, Yanming Shandong University of Science and Technology - Qingdao, China , Meng, Dazhi Beijing University of Technology - Beijing, China
Abstract :
Identifying the key genes of autism is of great significance for understanding its pathogenesis and improving the clinical level of
medicine. In this paper, we use the structural parameters (average degree) of gene correlation networks to identify genes related to
autism and study its pathogenesis. Based on the gene expression profiles of 82 autistic patients (the experimental group, E) and 64
healthy persons (the control group, C) in NCBI database, spearman correlation networks are established, and their average
degrees under different thresholds are analyzed. It is found that average degrees of C and E are basically separable at the full
thresholds. /is indicates that there is a clear difference between the network structures of C and E, and it also suggests that this
difference is related to the mechanism of disease. By annotating and enrichment analysis of the first 20 genes (MD-Gs) with
significant difference in the average degree, we find that they are significantly related to gland development, cardiovascular
development, and embryogenesis of nervous system, which support the results in Alter et al.’s original research. In addition, FIGF
and CSF3 may play an important role in the mechanism of autism.
Keywords :
Genes , Mechanism , Autism , NCBI
Journal title :
Computational and Mathematical Methods in Medicine