Title of article :
Crystal structure, Hirshfeld surface analysis and interaction energy and DFT studies of (S)-10-propargylpyrrolo[2,1-c][1,4]benzodiazepine-5,11-dione
Author/Authors :
Jeroundi, Dounia Laboratory of Applied Organic Chemistry - Sidi Mohamed Ben Abdellah University - Faculty of Sciences and Techniques, Morocco , Mazzah, Ahmed USR 3290 Miniaturisation pour l'analyse - Villeneuve d'Ascq Cedex - Université Lille1, France , Hökelek, Tuncer Department of Physics - Hacettepe University,Turkey , El Hadrami, El Mestafa Laboratory of Applied Organic Chemistry - Sidi Mohamed Ben Abdellah University - Faculty of Sciences and Techniques, Morocco , Renard, Catherine Unité de Catalyse et de Chimie du Solide (UCCS), UMR 8181 - Ecole Nationale Supérieure de Chimie de Lille - Université Lille 1, France , Haoudi, Amal Laboratory of Applied Organic Chemistry - Sidi Mohamed Ben Abdellah University - Faculty of Sciences and Techniques, Morocco , Essassi, El Mokhtar Laboratory of Applied Organic Chemistry - Sidi Mohamed Ben Abdellah University - Faculty of Sciences and Techniques, Morocco
Abstract :
The title compound, C15H14N2O2, consists of pyrrole and benzodiazepine units linked to a propargyl moiety, where the pyrrole and diazepine rings adopt half-chair and boat conformations, respectively. The absolute configuration was assigned on the the basis of L-proline, which was used in the synthesis of benzodiazepine. In the crystal, weak C—HBnz⋯ODiazp and C—HProprg⋯ODiazp (Bnz = benzene, Diazp = diazepine and Proprg = propargyl) hydrogen bonds link the molecules into two-dimensional networks parallel to the bc plane, enclosing R44(28) ring motifs, with the networks forming oblique stacks along the a-axis direction. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H⋯H (49.8%), H⋯C/C⋯H (25.7%) and H⋯O/O⋯H (20.1%) interactions. Hydrogen bonding and van der Waals interactions are the dominant interactions in the crystal packing. Computational chemistry indicates that in the crystal, C—H⋯O hydrogen-bond energies are 38.8 (for C—HBnz⋯ODiazp) and 27.1 (for C—HProprg⋯ODiazp) kJ mol−1. Density functional theory (DFT) optimized structures at the B3LYP/6–311 G(d,p) level are compared with the experimentally determined molecular structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap.
Keywords :
crystal structure , benzodiazepine , pyrrole , Hirshfeld surface
Journal title :
Acta Crystallographica Section E: Crystallographic Communications