Title of article :
Modified D-Glucofuranoses as New Black Fungus Protease Inhibitors: Computational Screening, Docking, Dynamics, and QSAR Study
Author/Authors :
Atiqur Rahman, M Department of Chemistry - Faculty of Science - Bioorganic and Medicinal Chemistry Laboratory - University of Chittagong - Chittagong, Bangladesh , Matin, M.M Department of Chemistry - Faculty of Science - Bioorganic and Medicinal Chemistry Laboratory - University of Chittagong - Chittagong, Bangladesh , Kumer, A Department of Chemistry - European University of Bangladesh - Gabtoli - Dhaka, Bangladesh , Chakma, U Department of Electrical and Electronic Engineering - European University of Bangladesh - Gabtoli - Dhaka, Bangladesh , Rahman, Md. Rezaur Department of Chemical Engineering and Energy Sustainability - Faculty of Engineering - Universiti Malaysia Sarawak - Jalan Datuk Mohammad Musa - Kota Samarahan, Malaysia
Abstract :
Notable antimicrobial functionality was found with different sugar esters which were also reported to inhibit the multidrug resistant
pathogens along with promising antimicrobial efficacy, and drug-likeness properties. Recent black fungus outbreak, especially in India,
along with COVID-19 surmounted the death toll and worsened the conditions severely due to lack of appropriate drugs. Hence, several
glucofuranose type esters 4-8 were screened against black fungus related protein (2WTP). These molecules, optimized by DFT, showed
good chemical and biological reactivity values especially with pathogens along with satisfactory ADMET profiles. With the good in vitro
antifungal activities, these compounds were subjected for molecular docking against the protein of mucormycosis’s pathogens, known as
black fungus, followed by calculation of inhibition constant, binding energy, and molecular dynamics of the protein-ligand complex. Also,
logpIC50 or pIC50 was calculated regarding the data for QSAR study. The molecular docking showed that 5-8 had a good binding affinity
(> -6.50 kcal mol-1) while 7 (-8.00 kcal mol-1) and 8 (-8.20 kcal mol-1) possessed excellent binding affinity. The inhibition constant and
binding energy of the compounds were found very lower among others with stable complexes in 5000 ns in molecular dynamics.
Considering all the results, sugar esters 7 and 8 are found to have promising drug properties.
Keywords :
Sugar esters (SEs) , Black fungus , Inhibition constant (Ki) , QSAR , Molecular docking , Molecular dynamics
Journal title :
Physical Chemistry Research