• DocumentCode
    1052154
  • Title

    Integrated access to heterogeneous data from NCBI

  • Author

    Ostell, James M.

  • Author_Institution
    Nat. Libr. of Med., Nat. Center for Biotechnol. Inf., Bethesda, MD, USA
  • Volume
    14
  • Issue
    6
  • fYear
    1995
  • Firstpage
    730
  • Lastpage
    736
  • Abstract
    The National Center for Biotechnology Information (NCBI) was created by Congress in 1988 to provide a stable government entity with a leadership role in coping with the information issues associated with this field. The NCBI Software Toolkit permits software tools to be developed in a heterogeneous environment. The use of abstract syntax notation (ASN.I) allows one to specify and exchange data across systems, and to reach biologists in whatever system they choose to work. However, the relevant data are still accumulated by different groups with different data models, different quality standards, in different subject domains, and with different time courses. NCBI has designed a data model to define a number of key data elements for molecular biology, including bibliographic data, nucleic acid sequence, protein sequence, genetic and physical maps, and the information about them. The model was constructed in as much detail as possible to accommodate the data contained in the heterogeneous sources, while still maintaining a common model
  • Keywords
    biology computing; database management systems; genetics; information retrieval systems; molecular biophysics; proteins; scientific information systems; ASN.I; NCBI; National Center for Biotechnology Information; Software Toolkit; abstract syntax notation; bibliographic data; common model; data model; data models; genetic maps; heterogeneous data; integrated access; key data elements; molecular biology; nucleic acid sequence; physical maps; protein sequence; quality standards; software tools; subject domains; time courses; Application software; Biological information theory; Biotechnology; CD-ROMs; Data models; Databases; Government; Libraries; Open systems; Software tools;
  • fLanguage
    English
  • Journal_Title
    Engineering in Medicine and Biology Magazine, IEEE
  • Publisher
    ieee
  • ISSN
    0739-5175
  • Type

    jour

  • DOI
    10.1109/51.473267
  • Filename
    473267