Title :
Fast Joint Reconstruction of Dynamic
and Field Maps in Functional MRI
Author :
Olafsson, Valur T. ; Noll, Douglas C. ; Fessler, Jeffrey A.
Author_Institution :
Dept. of Electr. Eng. & Comput. Sci., Michigan Univ., Ann Arbor, MI
Abstract :
Blood oxygen level dependent (BOLD) functional magnetic resonance imaging (fMRI) is conventionally done by reconstructing T2 * -weighted images. However, since the images are unitless they are nonquantifiable in terms of important physiological parameters. An alternative approach is to reconstruct R2 * maps which are quantifiable and have comparable BOLD contrast as T2* -weighted images. However, conventional R2 * mapping involves long readouts and ignores relaxation during readout. Another problem with fMRI imaging is temporal drift/fluctuations in off-resonance. Conventionally, a field map is collected at the start of the fMRI study to correct for off-resonance, ignoring any temporal changes. Here, we propose a new fast regularized iterative algorithm that jointly reconstructs R2 * and field maps for all time frames in fMRI data. To accelerate the algorithm we linearize the MR signal model, enabling the use of fast regularized iterative reconstruction methods. The regularizer was designed to account for the different resolution properties of both R2 * and field maps and provide uniform spatial resolution. For fMRI data with the same temporal frame rate as data collected for T2 * -weighted imaging the resulting R2 * maps performed comparably to T2 * -weighted images in activation detection while also correcting for spatially global and local temporal changes in off-resonance.
Keywords :
biomedical MRI; blood; R2 * maps; T2* -weighted images; blood oxygen level dependent; fast joint reconstruction; field maps; functional MRI; Acceleration; Blood; Fluctuations; Image reconstruction; Iterative algorithms; Iterative methods; Magnetic resonance imaging; Reconstruction algorithms; Signal resolution; Spatial resolution; ${ R}_{2}^{*}$; Field map; R R; fMRI; field map; functional magnetic resonance imaging (fMRI); joint reconstruction; linear approximation; magnetic field drift correction; physiological noise correction; Algorithms; Brain; Brain Mapping; Evoked Potentials; Humans; Image Enhancement; Image Interpretation, Computer-Assisted; Magnetic Resonance Imaging; Pattern Recognition, Automated; Phantoms, Imaging; Reproducibility of Results; Sensitivity and Specificity;
Journal_Title :
Medical Imaging, IEEE Transactions on
DOI :
10.1109/TMI.2008.917247