• DocumentCode
    1079209
  • Title

    Diffusion Basis Functions Decomposition for Estimating White Matter Intravoxel Fiber Geometry

  • Author

    Ramirez-Manzanares, Alonso ; Rivera, Mariano ; Vemuri, Baba C. ; Carney, Paul ; Mareci, Thomas

  • Author_Institution
    Centro de Investigacion en Matematicas A.C., Guanajuato
  • Volume
    26
  • Issue
    8
  • fYear
    2007
  • Firstpage
    1091
  • Lastpage
    1102
  • Abstract
    In this paper, we present a new formulation for recovering the fiber tract geometry within a voxel from diffusion weighted magnetic resonance imaging (MRI) data, in the presence of single or multiple neuronal fibers. To this end, we define a discrete set of diffusion basis functions. The intravoxel information is recovered at voxels containing fiber crossings or bifurcations via the use of a linear combination of the above mentioned basis functions. Then, the parametric representation of the intravoxel fiber geometry is a discrete mixture of Gaussians. Our synthetic experiments depict several advantages by using this discrete schema: the approach uses a small number of diffusion weighted images (23) and relatively small b values (1250 s/mm2 ), i.e., the intravoxel information can be inferred at a fraction of the acquisition time required for datasets involving a large number of diffusion gradient orientations. Moreover our method is robust in the presence of more than two fibers within a voxel, improving the state-of-the-art of such parametric models. We present two algorithmic solutions to our formulation: by solving a linear program or by minimizing a quadratic cost function (both with non-negativity constraints). Such minimizations are efficiently achieved with standard iterative deterministic algorithms. Finally, we present results of applying the algorithms to synthetic as well as real data.
  • Keywords
    biomedical MRI; medical image processing; neurophysiology; diffusion basis functions decomposition; diffusion weighted images; diffusion weighted magnetic resonance imaging; fiber bifurcations; fiber crossings; fiber tract geometry; intravoxel information; iterative deterministic algorithms; minimization; neuronal fibers; nonnegativity constraints; quadratic cost function; white matter intravoxel fiber geometry; Bifurcation; Computer science; Gaussian processes; Geometry; Iterative algorithms; Magnetic field measurement; Magnetic resonance imaging; Nerve fibers; Robustness; Tensile stress; Axon fiber pathways; basis pursuit; diffusion basis functions; diffusion weighted MRI (dW-MRI); high angular resolution diffusion images (HARDI); intravoxel; Algorithms; Animals; Brain; Diffusion Magnetic Resonance Imaging; Image Enhancement; Image Interpretation, Computer-Assisted; Imaging, Three-Dimensional; Nerve Fibers, Myelinated; Rats; Rats, Sprague-Dawley; Reproducibility of Results; Sensitivity and Specificity;
  • fLanguage
    English
  • Journal_Title
    Medical Imaging, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0278-0062
  • Type

    jour

  • DOI
    10.1109/TMI.2007.900461
  • Filename
    4280898