DocumentCode
1105388
Title
Discovering Novel Causal Patterns From Biomedical Natural-Language Texts Using Bayesian Nets
Author
Atkinson, J. ; Rivas, A.
Author_Institution
Dept. of Comput. Sci., Univ. de Concepcion, Concepcion
Volume
12
Issue
6
fYear
2008
Firstpage
714
Lastpage
722
Abstract
Most of the biomedicine text mining approaches do not deal with specific cause-effect patterns that may explain the discoveries. In order to fill this gap, this paper proposes an effective new model for text mining from biomedicine literature that helps to discover cause-effect hypotheses related to diseases, drugs, etc. The supervised approach combines Bayesian inference methods with natural-language processing techniques in order to generate simple and interesting patterns. The results of applying the model to biomedicine text databases and its comparison with other state-of-the-art methods are also discussed.
Keywords
belief networks; data mining; inference mechanisms; medical information systems; natural language processing; text analysis; Bayesian inference methods; Bayesian nets; biomedical natural-language text mining; biomedicine literature; biomedicine text databases; causal pattern discovery; cause-effect patterns; natural-language processing techniques; supervised approach; Bayesian methods; Cancer; Councils; Data mining; Databases; Diseases; Drugs; Filtering; Medical treatment; Text mining; Bayesian Nets; Bayesian nets; Biomedicine; biomedicine; information extraction; knowledge discovery; text mining; Abstracting and Indexing as Topic; Algorithms; Artificial Intelligence; Bayes Theorem; Database Management Systems; Databases, Bibliographic; Databases, Factual; Information Storage and Retrieval; Natural Language Processing; Neural Networks (Computer); Periodicals as Topic;
fLanguage
English
Journal_Title
Information Technology in Biomedicine, IEEE Transactions on
Publisher
ieee
ISSN
1089-7771
Type
jour
DOI
10.1109/TITB.2008.920793
Filename
4472920
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