• DocumentCode
    1137390
  • Title

    Object detection by correlation coefficients using azimuthally averaged reference projections

  • Author

    Nicholson, William V.

  • Author_Institution
    Sch. of Biomed. Sci., Univ. of Leeds, UK
  • Volume
    51
  • Issue
    11
  • fYear
    2004
  • Firstpage
    2006
  • Lastpage
    2012
  • Abstract
    A method of computing correlation coefficients for object detection that takes advantage of using azimuthally averaged reference projections is described and compared with two alternative methods-computing a cross-correlation function or a local correlation coefficient versus the azimuthally averaged reference projections. Two examples of an application from structural biology involving the detection of projection views of biological macromolecules in electron micrographs are discussed. It is found that a novel approach to computing a local correlation coefficient versus azimuthally averaged reference projections, using a rotational correlation coefficient, outperforms using a cross-correlation function and a local correlation coefficient in object detection from simulated images with a range of levels of simulated additive noise. The three approaches perform similarly in detecting macromolecular views in electron microscope images of a globular macromolecular complex (the ribosome). The rotational correlation coefficient outperforms the other methods in detection of keyhole limpet hemocyanin macromolecular views in electron micrographs.
  • Keywords
    biology computing; electron microscopy; image processing; macromolecules; molecular biophysics; molecular configurations; object detection; azimuthally averaged reference projections; biological macromolecules; correlation coefficients; cross-correlation function; electron micrographs; globular macromolecular complex; limpet hemocyanin macromolecular views; local correlation coefficient; object detection; ribosome; rotational correlation coefficient; simulated additive noise; simulated images; structural biology; Assembly; Biology computing; Computational modeling; Electron microscopy; Image reconstruction; Image resolution; Molecular biophysics; Object detection; Proteins; Signal to noise ratio; Algorithms; Artificial Intelligence; Computer Graphics; Cryoelectron Microscopy; Image Enhancement; Image Interpretation, Computer-Assisted; Information Storage and Retrieval; Numerical Analysis, Computer-Assisted; Pattern Recognition, Automated; Reproducibility of Results; Ribosomes; Sensitivity and Specificity; Statistics as Topic; Subtraction Technique;
  • fLanguage
    English
  • Journal_Title
    Biomedical Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9294
  • Type

    jour

  • DOI
    10.1109/TBME.2004.834271
  • Filename
    1344203