Title :
A Parallel Independent Component Analysis Approach to Investigate Genomic Influence on Brain Function
Author :
Liu, Jingyu ; Demirci, Oguz ; Calhoun, Vince D.
Author_Institution :
MIND Inst., New Mexico Univ., Albuquerque, NM
fDate :
6/30/1905 12:00:00 AM
Abstract :
Relationships between genomic data and functional brain images are of great interest but require new analysis approaches to integrate the high-dimensional data types. This letter presents an extension of a technique called parallel independent component analysis (paraICA), which enables the joint analysis of multiple modalities including interconnections between them. We extend our earlier work by allowing for multiple interconnections and by providing important overfitting controls. Performance was assessed by simulations under different conditions, and indicated reliable results can be extracted by properly balancing overfitting and underfitting. An application to functional magnetic resonance images and single nucleotide polymorphism array produced interesting findings.
Keywords :
biomedical MRI; brain; genetics; independent component analysis; medical image processing; functional brain image; functional magnetic resonance image; genomics; high-dimensional data type; joint analysis; parallel independent component analysis approach; single nucleotide polymorphism array; Bioinformatics; Brain; Covariance matrix; Genetics; Genomics; Image analysis; Independent component analysis; Magnetic analysis; Magnetic resonance imaging; Mathematical model; Entropy; fMRI; genetic association; independent component analysis (ICA); multimodal process; parallel ICA;
Journal_Title :
Signal Processing Letters, IEEE
DOI :
10.1109/LSP.2008.922513