Title :
A Bayesian Clustering Method for Tracking Neural Signals Over Successive Intervals
Author :
Wolf, Michael T. ; Burdick, Joel W.
Author_Institution :
Div. of Eng. & Appl. Sci., California Inst. of Technol., Pasadena, CA, USA
Abstract :
This paper introduces a new, unsupervised method for sorting and tracking the action potentials of individual neurons in multiunit extracellular recordings. Presuming the data are divided into short, sequential recording intervals, the core of our strategy relies upon an extension of a traditional mixture model approach that incorporates clustering results from the preceding interval in a Bayesian manner, while still allowing for signal nonstationarity and changing numbers of recorded neurons. As a natural byproduct of the sorting method, current and prior signal clusters can be matched over time in order to track persisting neurons. We also develop techniques to use prior data to appropriately seed the clustering algorithm and select the model class. We present results in a principal components space; however, the algorithm may be applied in any feature space where the distribution of a neuron´s spikes may be modeled as Gaussian. Applications of this signal classification method to recordings from macaque parietal cortex show that it provides significantly more consistent clustering and tracking results than traditional methods based on expectation-maximization optimization of mixture models. This consistent tracking ability is crucial for intended applications of the method.
Keywords :
Bayes methods; Gaussian distribution; bioelectric potentials; brain; expectation-maximisation algorithm; medical signal processing; neural nets; neurophysiology; pattern clustering; signal classification; Bayesian clustering method; Gaussian distribution; action potentials; expectation-maximization optimization; macaque parietal cortex; mixture model; multiunit extracellular recordings; neural signals; signal classification; spike sorting; spike tracking; unsupervised method; Bayesian methods; Brain modeling; Clustering algorithms; Clustering methods; Electrodes; Extracellular; Materials science and technology; Neurons; Permission; Principal component analysis; Signal generators; Sorting; Bayesian classification; clustering; expectation–maximization (EM); multitarget tracking; neuron tracking; spike sorting; Action Potentials; Algorithms; Bayes Theorem; Cluster Analysis; Electrophysiology; Models, Neurological; Neurons; Normal Distribution; Principal Component Analysis; Signal Processing, Computer-Assisted;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2009.2027604