DocumentCode
116804
Title
Development of a parallel program to perform a permutation test with the use of GPU
Author
Yakimenko, A.A. ; Khairetdinov, M.S. ; Avrorov, S.A.
Author_Institution
Novosibirsk State Tech. Univ., Novosibirsk, Russia
fYear
2014
fDate
2-4 Oct. 2014
Firstpage
723
Lastpage
727
Abstract
This paper proposes an algorithmic approach and program for solving search problems statistically significant over the biological characteristics of genes in a given set. The problem is connected with the implementation of well known in biology permutation (randomization) test. By taking into account the potential parallelism permutation test developed in parallel with the implementation of a program to graphically processors. Provides estimates of the effectiveness of the application of the developed program on empirical material.
Keywords
graphics processing units; parallel programming; GPU; algorithmic approach; biological characteristics; biology permutation; parallel program development; permutation test performance; potential parallelism permutation; Acceleration; Arrays; Biology; Educational institutions; Graphics processing units; Software algorithms; GPU; modeling; parallelization;
fLanguage
English
Publisher
ieee
Conference_Titel
Actual Problems of Electronics Instrument Engineering (APEIE), 2014 12th International Conference on
Conference_Location
Novosibirsk
Print_ISBN
978-1-4799-6019-4
Type
conf
DOI
10.1109/APEIE.2014.7040780
Filename
7040780
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