DocumentCode :
1302038
Title :
Retroactivity Attenuation in Bio-Molecular Systems Based on Timescale Separation
Author :
Jayanthi, Shridhar ; Del Vecchio, Domitilla
Author_Institution :
Electr. Eng. & Comput. Sci. Dept., Univ. of Michigan, Ann Arbor, MI, USA
Volume :
56
Issue :
4
fYear :
2011
fDate :
4/1/2011 12:00:00 AM
Firstpage :
748
Lastpage :
761
Abstract :
As with several engineering systems, bio-molecular systems display impedance-like effects at interconnections, called retroactivity. In this paper, we propose a mechanism that exploits the natural timescale separation present in bio-molecular systems to attenuate retroactivity. Retroactivity enters the dynamics of a bio-molecular system as a state dependent disturbance multiplied by gains that can be very large. By virtue of the system structure, retroactivity can be arbitrarily attenuated by internal system gains even when these are much smaller than the gains multiplying retroactivity terms. This result is obtained by employing a suitable change of coordinates and a nested application of the singular perturbation theorem on the finite time interval. As an application example, we show that two modules extracted from natural signal transduction pathways have a remarkable capability of attenuating retroactivity, which is certainly desirable in any (engineered or natural) signal transmission system.
Keywords :
biochemistry; biomolecular electronics; molecular biophysics; perturbation theory; biomolecular system; finite time interval; natural signal transduction pathways; retroactivity attenuation; signal transmission system; singular perturbation theorem; timescale separation; Attenuation; Biological system modeling; Equations; Impedance; Modeling; Proteins; Systems biology; Bio-molecular system; retroactivity;
fLanguage :
English
Journal_Title :
Automatic Control, IEEE Transactions on
Publisher :
ieee
ISSN :
0018-9286
Type :
jour
DOI :
10.1109/TAC.2010.2069631
Filename :
5555943
Link To Document :
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