DocumentCode
1362143
Title
The Quality Preserving Database: A Computational Framework for Encouraging Collaboration, Enhancing Power and Controlling False Discovery
Author
Aharoni, Ehud ; Neuvirth, Hani ; Rosset, Saharon
Author_Institution
Machine Learning & Data Min. Group, Haifa Univ. Campus, Haifa, Israel
Volume
8
Issue
5
fYear
2011
Firstpage
1431
Lastpage
1437
Abstract
The common scenario in computational biology in which a community of researchers conduct multiple statistical tests on one shared database gives rise to the multiple hypothesis testing problem. Conventional procedures for solving this problem control the probability of false discovery by sacrificing some of the power of the tests. We suggest a scheme for controlling false discovery without any power loss by adding new samples for each use of the database and charging the user with the expenses. The crux of the scheme is a carefully crafted pricing system that fairly prices different user requests based on their demands while keeping the probability of false discovery bounded. We demonstrate this idea in the context of HIV treatment research, where multiple researchers conduct tests on a repository of HIV samples.
Keywords
database management systems; medical computing; microorganisms; patient treatment; probability; statistical analysis; HIV treatment research; collaboration; computational biology; false discovery; multiple hypothesis testing problem; multiple statistical tests; power loss; pricing system; probability; quality preserving database; user requests; Bioinformatics; Collaboration; Communities; Computational biology; Databases; Pricing; Testing; Bonferroni method.; Family-wise error rate; multiple comparisons; Biomedical Research; Computational Biology; Data Interpretation, Statistical; Database Management Systems;
fLanguage
English
Journal_Title
Computational Biology and Bioinformatics, IEEE/ACM Transactions on
Publisher
ieee
ISSN
1545-5963
Type
jour
DOI
10.1109/TCBB.2010.105
Filename
5611486
Link To Document